Glitch in Enemy Of My Enemy mission

I've run into a game-breaking bug on the Brotherhood mission, "Enemy of my Enemy" in SR2. I was wondering if any of you have seen it or know how to get past it.

After the first part of the mission, killing the Ultor guards. you have to go into the hold and pick up some RPG ammo. Then you have to go back up to the deck and fight off the incoming Brotherhood waves. However, when I try to leave the hold the door is closed. I can't get out to go up to the deck. The only way out is to quit the mission. This makes the game unfinishable - is there any way past this? Alternatively, is there a way I can edit my save file to mark this mission as completed?

Thanks for any suggestions you might have.
 
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